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Javascript is client side and does not have any read/write permissions to the users hard drive. PHP is server side but does have read/write permissions to servers hard drive. PHP is the only way you are going to be able to do this. In paticular I would recommend PHP5 since version 4 is a lot more limited in its ability to handle XML files. If for some reason you can't use PHP at all then another server side language like Python or Ruby would work.
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